Cole spared Jennifer's life, but to what end? How did he stop her from spreading the deadly virus?

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Steve Wilkie/Syfy
Show:
12 Monkeys
Episode:
12 Monkeys Season 2 Episode 2: "Primary"
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12 Monkeys Photos, 12 Monkeys Season 2 Episode 2 Photos
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12 Monkeys Season 2 Episode 2 Quotes

Cole: Why didn't stopping you change things?
Jennifer: It did, it's just not the way you think.

Cassie: The first reported cases of the plague happened here in New York. Tomorrow, a trip around the world. Eleven more cities. The rest of the virus is still on her plane and we will destroy all of it after she's dead.
Cole: Wait! Jennifer, I know you don't want to do this.
Jennifer: But I'm supposed to. It's my purpose.
Cole: Jennifer I need you to trust me, a little bit. Okay.